QuPath H-DAB Project
  • ๐Ÿ“ŠQuPath guide for H-DAB Cell Counting Docs
  • ๐Ÿ’กPipeline
    • ๐Ÿ’กSimple Pipeline
  • Fundamentals
    • ๐Ÿ› ๏ธGetting Set Up
  • QuPath H-Dab Docs
    • ๐Ÿ’กQuPath H-DAB Tutorial
      • Creating and Opening of Projects
      • Estimating Stain Vectors
      • Training Image Creation
      • Cell Detection
      • Object Classifier
      • Tissue Detection
        • 1๏ธโƒฃAutomatic General Tissue Detection
        • 2๏ธโƒฃManual Specific Tissue Detection
    • ๐ŸงพQuPath Script
      • Batch Processing
    • ๐Ÿ“‚Output
  • Result Analysis Docs
    • ๐Ÿ’กProcessing Package Tutorial
      • Addition Information for Python insiders
      • In-Depth Python usage
    • ๐Ÿ—„๏ธFinal Spreadsheet creation
    • ๐Ÿ†˜Out-of-memory error
  • non-expert docs
    • ๐Ÿ”ŽQuPath Installation
    • ๐Ÿ’ปGit Bash Installation
    • ๐Ÿ–ฅ๏ธPython Installation & Packages
    • Git Bash installation
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  • Windows Installation
  • MacOs Installation
  1. non-expert docs

Git Bash Installation

If your not an expert on using Bah terminal, here you can download GitBash and use it on your system:

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Last updated 9 months ago

Be careful of downloading the Git version that is compliant with your system (Windows, or MacOs)

Windows Installation

  1. Visit the Git website:

    • Open your web browser and go to the official Git for Windows website: .

    • Click on the "Download" button to download the installer.

    • Make sure to choose the newest version of the installer on the official GitHub page, in the Assets section (Git-newest version-64-bit.exe)

  1. Run the Installer:

    Once the download is complete, run the installer by double-clicking on the downloaded file in the Dowloads folder on your local computer. Click "Yes" to allow the installation.

  2. Configure the Installation:

    During the installation process, you'll be prompted to make various choices. The default settings are sufficient. (Use Vim (the ubiquitous text editor) at Git's default editor))

  3. Complete the Installation:

    Continue the installation process, and click "Next" or "Install" as needed. Once the installation is complete, click "Finish" to close the installer.

  4. Verify the Installation:

    Open the Windows Start menu and type "Git Bash." Click on the Git Bash icon to open the terminal.

    Type git --version and press Enter. You should see the installed Git version information.

MacOs Installation

  1. Install Homebrew (if not already installed):

    • Open Terminal, which you can find in the Applications > Utilities folder.

    • Install Homebrew by pasting the following command and pressing Enter:

/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"
  1. Install Git using Homebrew:

    Once Homebrew is installed, use the following command to install Git.

brew install git
  1. Verify Installation: After the installation is complete, you can verify it by typing git --version in the Terminal and pressing Enter. You should see the installed Git version information.

  2. Configure Git (optional):

    Set your username and email using the following commands, replacing "Your Name" and "your.email@example.com" with your actual name and email:

git config --global user.name "Your Name"
git config --global user.email "your.email@example.com"

Congratulations! You've now installed Git on Windows and Git on Mac. Refer to the to continue with the tutorial.

๐Ÿ’ป
ProcessMRXS Package tutorial
Git for Windows
Latest version 2.43, last update 01.02.2024