QuPath H-DAB Project
  • ๐Ÿ“ŠQuPath guide for H-DAB Cell Counting Docs
  • ๐Ÿ’กPipeline
    • ๐Ÿ’กSimple Pipeline
  • Fundamentals
    • ๐Ÿ› ๏ธGetting Set Up
  • QuPath H-Dab Docs
    • ๐Ÿ’กQuPath H-DAB Tutorial
      • Creating and Opening of Projects
      • Estimating Stain Vectors
      • Training Image Creation
      • Cell Detection
      • Object Classifier
      • Tissue Detection
        • 1๏ธโƒฃAutomatic General Tissue Detection
        • 2๏ธโƒฃManual Specific Tissue Detection
    • ๐ŸงพQuPath Script
      • Batch Processing
    • ๐Ÿ“‚Output
  • Result Analysis Docs
    • ๐Ÿ’กProcessing Package Tutorial
      • Addition Information for Python insiders
      • In-Depth Python usage
    • ๐Ÿ—„๏ธFinal Spreadsheet creation
    • ๐Ÿ†˜Out-of-memory error
  • non-expert docs
    • ๐Ÿ”ŽQuPath Installation
    • ๐Ÿ’ปGit Bash Installation
    • ๐Ÿ–ฅ๏ธPython Installation & Packages
    • Git Bash installation
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  • Windows Installation
  • MacOs Installation
  1. non-expert docs

Git Bash installation

Git Bash is going to install a Bash Terminal prompt on your System so you would be able to launch the codes in the tutorial.

PreviousPython Installation & Packages

Last updated 1 year ago

Be careful of downloading the Git version that is compliant with your system (Windows or MacOS)

Windows Installation

If your not an expert on using GitBash, here there is a guide on how to download it:

Dowload Git for Windows:

  1. Open your web browser and go to the official Git for Windows website:.

    • Click on the "Download" button to download the installer.

      • You should download the installer from the GitHub page opening from the Assets section (refer always to the newest version in 64bit.exe, like the )

  2. Run the Installer:

    Once the installer is dowloaded, run the installer by double-clicking on the downloaded file (Git-<version>-64-bit.exe for 64-bit systems) in the Dowloads directory of you local computer to start the installation.

    • Click "Yes" to allow the installation.

  3. Configure the Installation:

    During the installation process, you'll be prompted to make various choices. The default settings are usually sufficient for most users. Make sure to select "Use Git from the Windows Command Prompt" during the "Choosing the default editor used by Git" step.

  4. Complete the installation:

    Click "Next" or "Install" as needed. Once the installation is finished, click "Finish" to close the installer.

  5. Verify Installation:

    • Open the Windows Start menu and type "Git Bash." Click on the Git Bash icon to open the terminal.

    • Type git --version and press Enter. You should see the installed Git version information.

MacOs Installation

If you're not an expert on using GitBash, here there is a guide on how to download it:

  1. Install Homebrew (if not already installed):

    • Open Terminal, which you can find in the Applications > Utilities folder.

    • Install Homebrew by pasting the following command and pressing Enter:

/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"
  1. Install Git using Homebrew:

    Once Homebrew is installed, use the following command to install Git

brew install git
  1. Verify Installation:

    After the installation is complete, you can verify it by typing git --version in the Terminal and pressing Enter. You should see the installed Git version information.

Congratulations! You've successfully installed Git Bash on Windows and Git on Mac.

Now you are ready to follow the to analyse your slides

QuPath Tutorial
Git for Windows
Git-2.43.0-64-bit.exe
Newest version is the 2.43, last updated 01.02.2024